Help
Three GoMapMan applications:
Tutorials on YouTube
Metabolite Ontology
Browse bins
Open sub-bins by clicking on the selected bin. Opened bins are shown as opened and closed as closed folders (see Legend below). Ortholog groups are presented by a white icon, and genes by green (those belonging to orthologs) or purple icons (those not belonging to orthologs).
Metabolite
Ontology bin - opened
Ontology bin - closed
Select a metabolite on it and Metabolite Details view will open.
Metabolite Details View
In this view information on the individual metabolite including annotations and links to other sources are listed.
- Identifier, with link to the primary database
- Plant: green plants
- Description: N/A
- Short Name: N/A
- Synonym: CHEBI identifier (if available)
- Genomic Context: N/A
- Source of the metabolite
- Last modified: date of last modification of the metabolite
- Ontology annotations: bin(s) that the metabolite belongs to; click to view the bin in the ontology tree
- Orthologs: N/A
- Microarray features: N/A
- Annotations: N/A
Search
Search is enabled for metabolite identifiers (names).
Exports
Ontology exports of metabolites features are available for import to:
There also generic exports available, generally linking one identifier to another.
Curation
Metabolite position editing is not possible.